BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031H08SP1|AL429482
(866 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig765 714 0.0
3x_Contig1135 441 e-124
>3x_Contig765
Length = 1688
Score = 714 bits (338), Expect = 0.0
Identities = 397/426 (93%), Gaps = 1/426 (0%)
Strand = Plus / Plus
Query: 442 ttcmtgacttgasacyyagctccaaccatttattcmtatatscsbtbcymtytggtccca 501
||| |||||||| || ||||||||| |||||||| ||||| | | | ||||||||
Sbjct: 32 ttcatgacttgaaacttagctccaacaatttattcatatataaatttctatttggtccca 91
Query: 502 ttatcacmagccgaaaagctctgttgcyaacctggcgctgtttttatttcatcatatttg 561
||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 92 ttatcacaagcagaaaagctctgttgctaacctggcgctgtttttatttcatcatatttg 151
Query: 562 tsctttgtagtttcgattactctcgccggcgtcaaamgtttttcttgtttttttttaaaa 621
| ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||
Sbjct: 152 ttctttgtagtttcgattactctcgacgacgtcaaaagtttttcttgtttttttttaaaa 211
Query: 622 atgawttaatttaatcgaaaattcagatatttcaatgtcagttaacaccaagacaacacc 681
|||| ||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 212 atgatttaatttaatcgaaaattcagatttttcaatgtcagtaaacaccaagacaacacc 271
Query: 682 acactaactaaaacgatggtttaacggtccaaatagtcaacataatgagaggctatgcta 741
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 272 acactaactaaaacgatggtttaacggcccaaatagtcaacataatgagaggctatgcta 331
Query: 742 aagataagaggtgaagaaattagatgtwatctggaactattgcctggggsaagtg-aaca 800
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||
Sbjct: 332 aagataagaggtgaagaaattagatgtaatctggaactattgcctggggcaagtgaaaca 391
Query: 801 tcaacgttaatccgataattgcatagcttatttaacacattaatataatctaagtwacta 860
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 392 tcaacgttaatccgataattgcatagcttatttaacacattaatataatctaagtaacta 451
Query: 861 caaaga 866
||||||
Sbjct: 452 caaaga 457
>3x_Contig1135
Length = 8148
Score = 441 bits (209), Expect = e-124
Identities = 252/285 (88%)
Strand = Plus / Plus
Query: 1 tttatttaccgagcactcggatgtagcataatacatagtgaaacctcaaccmctgtctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 7859 tttatttaccgagcactcggatgtagcataatacatagtgaaacctcaaccactgtctaa 7918
Query: 61 mgcatattgttaamttctatcaacmccctacacagcatggtacttcttgtttccygcmtt 120
| |||||||||| |||||||||| | ||||||||||||||||||||||||||| || ||
Sbjct: 7919 agaatattgttaaattctatcaacacactacacagcatggtacttcttgtttcctgcatt 7978
Query: 121 tmtcycmccgattttmttttgttggagaccmggttacyatgttttcytagagaatggctt 180
| || | |||||||| |||||||||||||| |||||| |||||||| |||||||||||||
Sbjct: 7979 tatctcaccgattttattttgttggagaccaggttactatgttttcttagagaatggctt 8038
Query: 181 accycacmaytttcgttcmcmccmcccmtttcgvagacttcgcmcmcgttgaatttgcmc 240
||| || | |||||||| | || ||| ||||| ||||||||| | |||||||||||| |
Sbjct: 8039 acctcaaaattttcgttcacaccacccatttcgaagacttcgcacacgttgaatttgcac 8098
Query: 241 accggtaacmagtacccgataammgasataatgagccatagavag 285
||||||||| |||||||||||| || ||||||||| ||||| ||
Sbjct: 8099 accggtaacaagtacccgataaaagaaataatgagcaatagaaag 8143
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.46 0.724 1.38
Gapped
Lambda K H
1.46 0.724 1.38
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3815
Number of Sequences: 1807
Number of extensions: 3815
Number of successful extensions: 136
Number of sequences better than 1.0e-20: 2
length of query: 866
length of database: 10,358,551
effective HSP length: 15
effective length of query: 851
effective length of database: 10,331,446
effective search space: 8792060546
effective search space used: 8792060546
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.6 bits)
S1: 11 (23.7 bits)
S2: 47 (99.7 bits)